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Viral genomes

Viral genomes


Product Introduction

Genomic study of single virus, either isolated or in environmental samples, includes virus particles collection, whole genome amplification, sequencing, and data analysis.

Whole genome sequencing of viruses plays a pivotal role in the identification of emerging infectious diseases, development of rapid detection reagents, formulation of vaccines and drugs, as well as tracing the source of disease. Moreover, it holds immense importance in understanding the viral diversity, adaptation, and evolution.
 

Technical parameters

Product

Sequencing strategy

Data volume

Project duration

Virome

NovaSeq PE150

≥10 G raw data

45 days

 

Experimental process

Sample Collection
Nucleic Acid Extraction and Quality Inspection
Library preparation and warehouse inspection
on-board sequencing

Analysis process

Case analysis

Case 1: Discovery of a novel virus in terrestrial arthropods highlights the diversity of single-stranded DNA viruses
In this study, the authors sequenced viruses from terrestrial arthropods and obtained their genomic information. Through phylogenetic analysis, they demonstrated the evolution and diversity of the viruses. Subsequent analyses revealed that most known CRESS DNA viruses were widely distributed in invertebrates, reflecting their ancient evolutionary history and highlighting the importance of further researches.

Figure 5 Phylogenetic tree of arthropod viruses
 
 

Reference:Rosario K, Mettel KA, Benner BE et al.Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates[J].Peer J,2018,6(3):e5761.

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